STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAN3poly(A) specific ribonuclease subunit PAN3. (692 aa)    
Predicted Functional Partners:
PAN2
poly(A) specific ribonuclease subunit PAN2.
    
 0.999
PABPC4
poly(A) binding protein cytoplasmic 4.
    
 0.939
PABPC1
poly(A) binding protein cytoplasmic 1.
    
 0.939
ENSPCAP00000010984
annotation not available
    
 0.939
ENSPCAP00000003431
annotation not available
    
 0.867
TREX2
Three prime repair exonuclease 2.
    
 0.867
REXO5
RNA exonuclease 5.
    
 0.867
REXO1
RNA exonuclease 1 homolog.
    
 0.867
REXO4
REX4 homolog, 3'-5' exonuclease.
    
 0.867
ISG20L2
Interferon stimulated exonuclease gene 20 like 2.
    
 0.867
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.