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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCA2OCA2 melanosomal transmembrane protein. (732 aa)    
Predicted Functional Partners:
ACP1
Acid phosphatase 1.
    
 0.942
GET3
Guided entry of tail-anchored proteins factor 3, ATPase.
    
 0.929
TYR
Tyrosinase.
   
  
 0.648
SLC24A5
Solute carrier family 24 member 5.
  
  
 0.638
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
     
 0.631
MYBPH
Myosin binding protein H.
      
 0.590
AMT
Aminomethyltransferase.
      
 0.586
SLC45A2
Solute carrier family 45 member 2.
      
 0.580
CCS
Copper chaperone for superoxide dismutase.
     
 0.578
SLC8B1
Solute carrier family 8 member B1.
     
 0.570
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.