STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPA5Carboxypeptidase A5. (436 aa)    
Predicted Functional Partners:
CARF
Calcium responsive transcription factor.
      
 0.894
ENSPCAP00000010224
annotation not available
   
 
 0.812
SSMEM1
Serine rich single-pass membrane protein 1.
      
 0.769
SERINC4
Serine incorporator 4.
   
  
 0.695
NT5M
5',3'-nucleotidase, mitochondrial.
      
 0.692
AIG1
Androgen induced 1.
      
 0.590
ECEL1
Endothelin converting enzyme like 1.
    
 0.575
SPATA20
Spermatogenesis associated 20.
     
 0.575
LDHD
Lactate dehydrogenase D.
     
 0.568
ENSPCAP00000015803
annotation not available
      
 0.565
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.