STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SELENOOSelenoprotein O. (656 aa)    
Predicted Functional Partners:
LIAS
Lipoic acid synthetase.
    
  0.697
ENSPCAP00000004507
annotation not available
   
    0.691
ENSPCAP00000009965
annotation not available
   
    0.691
EEFSEC
Eukaryotic elongation factor, selenocysteine-tRNA specific.
   
  
 0.613
SEPHS1
Selenophosphate synthetase 1.
     
 0.607
ENSPCAP00000001849
annotation not available
  
  
 0.595
SELENOT
Selenoprotein T.
      
 0.591
ENSPCAP00000007187
annotation not available
      
 0.587
SELENOS
Selenoprotein S.
      
 0.587
SELENOM
Selenoprotein M.
      
 0.575
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.