STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H13Zinc finger CCCH-type containing 13. (1655 aa)    
Predicted Functional Partners:
ENSPCAP00000003970
annotation not available
    
 0.999
VIRMA
Vir like m6A methyltransferase associated.
   
 0.999
RBM15
RNA binding motif protein 15.
   
 0.997
ENSPCAP00000003246
annotation not available
    
 0.990
CBLL1
Cbl proto-oncogene like 1.
    
 0.984
ALYREF
Aly/REF export factor.
   
 0.968
METTL4
Methyltransferase like 4.
    
 0.962
ENSPCAP00000009063
annotation not available
   
   0.959
MED30
Mediator complex subunit 30.
   
   0.957
MED23
Mediator complex subunit 23.
   
   0.957
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.