STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN18Tetraspanin 18. (248 aa)    
Predicted Functional Partners:
ENSPCAP00000000338
annotation not available
     
 0.764
CD19
CD19 molecule.
   
 0.760
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.669
MST1R
Macrophage stimulating 1 receptor.
    
  0.668
TXNL4B
Thioredoxin like 4B.
      
 0.528
TSG101
Tumor susceptibility 101.
      
 0.525
PDGFB
Platelet derived growth factor subunit B.
    
 0.517
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.516
ADAM10
ADAM metallopeptidase domain 10.
    
 0.502
GHITM
Growth hormone inducible transmembrane protein.
      
 0.501
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.