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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD3Potassium channel tetramerization domain containing 3. (492 aa)    
Predicted Functional Partners:
KCTD19
Potassium channel tetramerization domain containing 19.
    
 
 0.678
SHKBP1
SH3KBP1 binding protein 1.
  
 
  
0.637
LRRC40
Leucine rich repeat containing 40.
    
   0.615
RRP15
Ribosomal RNA processing 15 homolog.
      
 0.529
GPATCH2
G-patch domain containing 2.
      
 0.529
SPATA17
Spermatogenesis associated 17.
      
 0.528
KCTD7
Potassium channel tetramerization domain containing 7.
    
 
 0.511
FBXW8
F-box and WD repeat domain containing 8.
      
 0.509
KCTD21
Potassium channel tetramerization domain containing 21.
    
 
0.507
BRINP3
BMP/retinoic acid inducible neural specific 3.
      
 0.499
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.