Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001145annotation not available (394 aa)    
Predicted Functional Partners:
CSNK2B
Casein kinase 2 beta.
   
 0.993
RNF2
Ring finger protein 2.
   
  0.983
PCGF3
Polycomb group ring finger 3.
    
 0.983
PCGF5
Polycomb group ring finger 5.
    
 0.980
RING1
Ring finger protein 1.
   
  0.977
SIRT1
Sirtuin 1.
    
  0.965
RYBP
RING1 and YY1 binding protein.
    
  0.964
CBX4
Chromobox 4.
    
  0.950
ENSPCAP00000000848
annotation not available
    
 0.948
PCGF2
Polycomb group ring finger 2.
    
 0.945
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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