STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM20BFAM20B glycosaminoglycan xylosylkinase. (409 aa)    
Predicted Functional Partners:
ENAM
Enamelin.
    
 0.630
SLCO1A2
Solute carrier organic anion transporter family member 1A2.
   
    0.630
WDR49
WD repeat domain 49.
   
  0.616
QSOX2
Quiescin sulfhydryl oxidase 2.
     
 0.589
AMBN
Ameloblastin.
    
 0.579
GPC1
Glypican 1.
    
 0.577
SDC2
Syndecan 2.
    
 0.576
SPARC
Secreted protein acidic and cysteine rich.
     
 0.567
SDC1
Syndecan 1.
    
 0.554
WFS1
Wolframin ER transmembrane glycoprotein.
     
 0.544
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.