STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NR1D1Nuclear receptor subfamily 1 group D member 1. (609 aa)    
Predicted Functional Partners:
NCOR1
Nuclear receptor corepressor 1.
    
 0.985
NCOR2
Nuclear receptor corepressor 2.
    
 0.972
GPS2
G protein pathway suppressor 2.
    
 0.895
HDAC3
Histone deacetylase 3.
    
 0.763
NR0B1
Nuclear receptor subfamily 0 group B member 1.
    
 0.723
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
     
 0.718
NFIL3
Nuclear factor, interleukin 3 regulated.
   
 
 0.632
NR1D2
Nuclear receptor subfamily 1 group D member 2.
  
0.617
CRY1
Cryptochrome circadian regulator 1.
      
 0.583
HDAC1
Histone deacetylase 1.
    
 0.566
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.