STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYBPC1Myosin binding protein C, slow type. (1169 aa)    
Predicted Functional Partners:
WDR18
WD repeat domain 18.
   
 0.840
ENSPCAP00000014868
annotation not available
   
 0.834
TEX10
Testis expressed 10.
   
 0.805
ENSPCAP00000013776
annotation not available
   
 0.785
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.783
TNNC2
Troponin C2, fast skeletal type.
   
 0.774
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.761
ACTN2
Actinin alpha 2.
   
 0.744
TNNI2
Troponin I2, fast skeletal type.
   
 
 0.730
NEB
Nebulin.
   
 0.729
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.