STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001159annotation not available (322 aa)    
Predicted Functional Partners:
ALYREF
Aly/REF export factor.
    
 0.962
ENSPCAP00000009275
annotation not available
    
 0.958
ENSPCAP00000008698
annotation not available
    
 0.952
NXT2
Nuclear transport factor 2 like export factor 2.
    
 0.942
RANBP2
RAN binding protein 2.
    
 0.939
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
    
 0.927
THOC5
THO complex 5.
    
 0.910
NCBP2
Nuclear cap binding protein subunit 2.
   
 0.909
NUP98
Nucleoporin 98.
    
 0.890
UPF3A
UPF3A regulator of nonsense mediated mRNA decay.
    
 0.890
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.