STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTP4A1Protein tyrosine phosphatase 4A1. (171 aa)    
Predicted Functional Partners:
RABGGTB
Rab geranylgeranyltransferase subunit beta.
    
 0.775
ENSPCAP00000015559
annotation not available
   
    0.650
CNNM2
Cyclin and CBS domain divalent metal cation transport mediator 2.
    
 
 0.645
CNNM3
Cyclin and CBS domain divalent metal cation transport mediator 3.
    
 
 0.645
CNNM4
Cyclin and CBS domain divalent metal cation transport mediator 4.
    
 
 0.645
AUP1
AUP1 lipid droplet regulating VLDL assembly factor.
    
   0.576
CSNK2B
Casein kinase 2 beta.
   
 
  0.489
ENSPCAP00000001145
annotation not available
     
 0.470
CSNK2A2
Casein kinase 2 alpha 2.
     
 0.470
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.