STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NVLNuclear VCP like. (835 aa)    
Predicted Functional Partners:
MTREX
Mtr4 exosome RNA helicase.
   
 0.998
WDR74
WD repeat domain 74.
   
 0.997
GNL3L
G protein nucleolar 3 like.
   
 0.987
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.978
EXOSC10
Exosome component 10.
   
 0.976
ENSPCAP00000015177
annotation not available
   
 0.975
NAT10
N-acetyltransferase 10.
  
 
 0.974
RPF2
Ribosome production factor 2 homolog.
   
 0.971
MAK16
MAK16 homolog.
   
 0.970
ZFC3H1
Zinc finger C3H1-type containing.
     
 0.968
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.