STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRMT10CtRNA methyltransferase 10C, mitochondrial RNase P subunit. (404 aa)    
Predicted Functional Partners:
HSD17B10
Hydroxysteroid 17-beta dehydrogenase 10.
    
 0.998
ENSPCAP00000006027
annotation not available
   
 0.997
TRMT6
tRNA methyltransferase 6.
   
 
 0.987
TRMT61B
tRNA methyltransferase 61B.
   
 
 0.985
TRMT61A
tRNA methyltransferase 61A.
   
 
 0.981
WDR4
WD repeat domain 4.
   
 0.979
METTL1
Methyltransferase like 1.
   
 0.979
TRMT11
tRNA methyltransferase 11 homolog.
   
 
 0.974
MRPL44
Mitochondrial ribosomal protein L44.
   
 
 0.963
ELAC2
elaC ribonuclease Z 2.
   
 
 0.958
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.