STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001172annotation not available (252 aa)    
Predicted Functional Partners:
NUP153
Nucleoporin 153.
   
 0.868
NUP107
Nucleoporin 107.
    
 0.850
NUP205
Nucleoporin 205.
   
 0.795
NUP133
Nucleoporin 133.
   
 0.774
ENSPCAP00000009275
annotation not available
    
 0.767
NUP85
Nucleoporin 85.
    
 0.760
RANBP2
RAN binding protein 2.
   
 0.757
NUP93
Nucleoporin 93.
   
 0.755
NUP54
Nucleoporin 54.
    
 0.752
ENSPCAP00000008977
annotation not available
   
 0.752
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.