STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRATLecithin retinol acyltransferase. (230 aa)    
Predicted Functional Partners:
ENSPCAP00000005734
annotation not available
     
 0.943
ENSPCAP00000013788
annotation not available
     
 0.940
ENSPCAP00000001823
annotation not available
     
 0.928
RDH10
Retinol dehydrogenase 10.
     
 0.923
CYP26A1
Cytochrome P450 family 26 subfamily A member 1.
   
 
 0.920
RDH5
Retinol dehydrogenase 5.
     
 0.914
ENSPCAP00000011346
annotation not available
     
 0.914
ENSPCAP00000011490
annotation not available
     
 0.913
ENSPCAP00000008668
annotation not available
     
 0.910
RDH12
Retinol dehydrogenase 12.
     
 0.910
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.