STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIX6SIX homeobox 6. (297 aa)    
Predicted Functional Partners:
EYA3
EYA transcriptional coactivator and phosphatase 3.
   
 
 0.732
ENSPCAP00000003836
annotation not available
   
 
 0.732
EYA4
EYA transcriptional coactivator and phosphatase 4.
   
 
 0.732
EYA1
EYA transcriptional coactivator and phosphatase 1.
   
 
 0.732
DLX1
Distal-less homeobox 1.
  
  
 0.664
ENSPCAP00000005195
annotation not available
   
  
 0.563
PAX6
Paired box 6.
   
 
 0.550
DNMBP
Dynamin binding protein.
      
 0.523
TLE1
TLE family member 1, transcriptional corepressor.
    
 
 0.517
ENSPCAP00000003128
annotation not available
    
 
 0.501
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.