Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001183annotation not available (370 aa)    
Predicted Functional Partners:
PPL
Periplakin.
    
 
 0.812
ENSPCAP00000004437
annotation not available
    
 0.707
ENSPCAP00000008526
annotation not available
    
 0.707
KRTAP3-1
Keratin associated protein 3-1.
   
  
 0.610
EVPL
Envoplakin.
    
 
 0.601
KRT82
Keratin 82.
  
  
 0.589
GAREM1
GRB2 associated regulator of MAPK1 subtype 1.
      
 0.562
DSG4
Desmoglein 4.
   
 
 0.554
ENSPCAP00000003897
annotation not available
      
 0.544
KRT85
Keratin 85.
   
 
 0.536
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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