MYOD1 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MYOD1

Myogenic differentiation 1. (318 aa)

Predicted Functional Partners:

TCF3

0.936

EP300

0.910

TBPL1

0.891

TCF12

0.874

TCF4

0.874

ENSPCAP00000002648

0.871

ENSPCAP00000012604

0.871

MEF2A

0.827

MEF2D

0.826

MYOG

0.814

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCAP00000002648	EP300	ENSPCAP00000002648	ENSPCAP00000011493	annotation not available	E1A binding protein p300.	0.691
ENSPCAP00000002648	MYOD1	ENSPCAP00000002648	ENSPCAP00000001195	annotation not available	Myogenic differentiation 1.	0.871
ENSPCAP00000002648	MYOG	ENSPCAP00000002648	ENSPCAP00000006373	annotation not available	Myogenin.	0.574
ENSPCAP00000002648	TBPL1	ENSPCAP00000002648	ENSPCAP00000001233	annotation not available	TATA-box binding protein like 1.	0.853
ENSPCAP00000012604	EP300	ENSPCAP00000012604	ENSPCAP00000011493	annotation not available	E1A binding protein p300.	0.691
ENSPCAP00000012604	MYOD1	ENSPCAP00000012604	ENSPCAP00000001195	annotation not available	Myogenic differentiation 1.	0.871
ENSPCAP00000012604	MYOG	ENSPCAP00000012604	ENSPCAP00000006373	annotation not available	Myogenin.	0.574
ENSPCAP00000012604	TBPL1	ENSPCAP00000012604	ENSPCAP00000001233	annotation not available	TATA-box binding protein like 1.	0.853
EP300	ENSPCAP00000002648	ENSPCAP00000011493	ENSPCAP00000002648	E1A binding protein p300.	annotation not available	0.691
EP300	ENSPCAP00000012604	ENSPCAP00000011493	ENSPCAP00000012604	E1A binding protein p300.	annotation not available	0.691
EP300	MEF2A	ENSPCAP00000011493	ENSPCAP00000012892	E1A binding protein p300.	Myocyte enhancer factor 2A.	0.944
EP300	MEF2D	ENSPCAP00000011493	ENSPCAP00000002186	E1A binding protein p300.	Myocyte enhancer factor 2D.	0.726
EP300	MYOD1	ENSPCAP00000011493	ENSPCAP00000001195	E1A binding protein p300.	Myogenic differentiation 1.	0.910
EP300	MYOG	ENSPCAP00000011493	ENSPCAP00000006373	E1A binding protein p300.	Myogenin.	0.458
EP300	TBPL1	ENSPCAP00000011493	ENSPCAP00000001233	E1A binding protein p300.	TATA-box binding protein like 1.	0.558
EP300	TCF12	ENSPCAP00000011493	ENSPCAP00000002247	E1A binding protein p300.	Transcription factor 12.	0.782
EP300	TCF3	ENSPCAP00000011493	ENSPCAP00000000151	E1A binding protein p300.	Transcription factor 3.	0.837
EP300	TCF4	ENSPCAP00000011493	ENSPCAP00000009547	E1A binding protein p300.	Transcription factor 4.	0.782
MEF2A	EP300	ENSPCAP00000012892	ENSPCAP00000011493	Myocyte enhancer factor 2A.	E1A binding protein p300.	0.944
MEF2A	MEF2D	ENSPCAP00000012892	ENSPCAP00000002186	Myocyte enhancer factor 2A.	Myocyte enhancer factor 2D.	0.964