Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F13BCoagulation factor XIII B chain. (659 aa)    
Predicted Functional Partners:
ENSPCAP00000010088
annotation not available
    
 0.998
TGM1
Transglutaminase 1.
    
 0.970
F2
Coagulation factor II, thrombin.
   
 0.958
FGG
Fibrinogen gamma chain.
   
 0.950
FGA
Fibrinogen alpha chain.
   
 0.942
ENSPCAP00000000255
annotation not available
   
 
 0.940
ENSPCAP00000008074
annotation not available
   
 0.924
ENSPCAP00000009621
annotation not available
   
  0.872
HGD
Homogentisate 1,2-dioxygenase.
   
    0.869
FGB
Fibrinogen beta chain.
   
 0.857
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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