close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE6HPhosphodiesterase 6H. (83 aa)    
Predicted Functional Partners:
PDE6C
Phosphodiesterase 6C.
   
 
 0.892
GNAT2
G protein subunit alpha transducin 2.
   
 
 0.886
ENSPCAP00000013860
annotation not available
   
 
  0.882
ENSPCAP00000014970
annotation not available
   
 
 0.871
GNAT1
G protein subunit alpha transducin 1.
   
 
 0.850
PDE6G
Phosphodiesterase 6G.
  
 
 
0.804
PDE6D
Phosphodiesterase 6D.
     
 0.793
NPR2
Natriuretic peptide receptor 2.
     
 0.788
NPR1
Natriuretic peptide receptor 1.
     
 0.788
GUCY2C
Guanylate cyclase 2C.
     
 0.786
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.