STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDE6HPhosphodiesterase 6H. (83 aa)    
Predicted Functional Partners:
PDE6C
Phosphodiesterase 6C.
   
 
 0.968
GNAT2
G protein subunit alpha transducin 2.
   
 
 0.961
ENSPCAP00000014970
annotation not available
   
 
 0.944
PDE6D
Phosphodiesterase 6D.
     
 0.923
GNAT1
G protein subunit alpha transducin 1.
   
 
 0.923
GNB1
G protein subunit beta 1.
     
 0.914
CNGA1
Cyclic nucleotide gated channel subunit alpha 1.
   
  
 0.910
ENSPCAP00000011545
annotation not available
   
 
 0.907
ENSPCAP00000011576
annotation not available
   
 
 0.907
PDE6G
Phosphodiesterase 6G.
   
 
  0.904
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.