Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTC29Tetratricopeptide repeat domain 29. (464 aa)    
Predicted Functional Partners:
DNAH1
Dynein axonemal heavy chain 1.
   
 
 0.977
WDR63
WD repeat domain 63.
   
 
 0.969
CFAP43
Cilia and flagella associated protein 43.
   
 
 0.966
CFAP58
Cilia and flagella associated protein 58.
   
 
 0.957
ENSPCAP00000004787
annotation not available
   
 
 0.954
ENSPCAP00000008050
annotation not available
   
 
 0.947
CFAP52
Cilia and flagella associated protein 52.
   
 
 0.935
ENSPCAP00000007068
annotation not available
   
 
 0.935
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.934
RSPH3
Radial spoke head 3.
   
 
 0.931
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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