STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRT4Keratin 4. (590 aa)    
Predicted Functional Partners:
DSG4
Desmoglein 4.
     
 0.915
DSG1
Desmoglein 1.
    
 0.868
DSG3
Desmoglein 3.
    
  0.852
DSG2
Desmoglein 2.
    
  0.852
KRT15
Keratin 15.
   
 0.837
ENSPCAP00000001595
annotation not available
   
 0.837
ENSPCAP00000007126
annotation not available
    
 0.794
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.697
RANBP2
RAN binding protein 2.
    
 0.648
CPSF1
Cleavage and polyadenylation specific factor 1.
    
  0.636
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.