STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSMEM1Serine rich single-pass membrane protein 1. (245 aa)    
Predicted Functional Partners:
ENSPCAP00000007139
annotation not available
      
 0.583
SPATA46
Spermatogenesis associated 46.
      
 0.582
ENSPCAP00000010334
annotation not available
      
 0.529
VPS54
VPS54 subunit of GARP complex.
      
 0.522
SPEF2
Sperm flagellar 2.
      
 0.520
TM9SF3
Transmembrane 9 superfamily member 3.
      
 0.503
BPIFA1
BPI fold containing family A member 1.
  
     0.482
LYPD4
LY6/PLAUR domain containing 4.
  
     0.473
ENSPCAP00000013559
annotation not available
  
     0.472
IL7R
Interleukin 7 receptor.
  
     0.462
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.