Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MR1Major histocompatibility complex, class I-related. (341 aa)    
Predicted Functional Partners:
B2M
Beta-2-microglobulin.
   
 0.978
RPA2
Replication protein A2.
   
 0.978
CD8A
CD8a molecule.
    
 0.953
HLA-DRA
Major histocompatibility complex, class II, DR alpha.
   
 
 0.939
ENSPCAP00000003318
annotation not available
   
 
 0.938
ENSPCAP00000012255
annotation not available
    
  0.935
CD74
CD74 molecule.
   
 
  0.935
HLA-DOA
Major histocompatibility complex, class II, DO alpha.
   
 
 0.933
HLA-DMA
Major histocompatibility complex, class II, DM alpha.
   
 
 0.933
HLA-DPA1
Major histocompatibility complex, class II, DP alpha 1.
   
 
 0.932
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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