Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001227annotation not available (350 aa)    
Predicted Functional Partners:
PEBP4
Phosphatidylethanolamine binding protein 4.
   
  
 0.711
PRRG2
Proline rich and Gla domain 2.
      
 0.581
ENSPCAP00000015333
annotation not available
    
 
 0.504
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 
 0.494
NPRL2
NPR2 like, GATOR1 complex subunit.
    
 
 0.491
GORASP1
Golgi reassembly stacking protein 1.
    
  0.481
NPRL3
NPR3 like, GATOR1 complex subunit.
    
 
 0.481
GORASP2
Golgi reassembly stacking protein 2.
    
  0.481
KPTN
Kaptin, actin binding protein.
    
   0.472
ENSPCAP00000004537
annotation not available
    
   0.472
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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