STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARCHF7Membrane associated ring-CH-type finger 7. (704 aa)    
Predicted Functional Partners:
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 
 0.691
UBE2J2
Ubiquitin conjugating enzyme E2 J2.
    
 
 0.633
VCP
Valosin containing protein.
    
 
 0.613
SPATA5L1
Spermatogenesis associated 5 like 1.
    
 
 0.613
ENSPCAP00000013714
annotation not available
    
 
 0.613
FAF2
Fas associated factor family member 2.
    
 
 0.611
ENSPCAP00000003689
annotation not available
    
 
 0.611
FAF1
Fas associated factor 1.
    
 
 0.611
USP7
Ubiquitin specific peptidase 7.
    
 
 0.579
UBE2G2
Ubiquitin conjugating enzyme E2 G2.
    
 
 0.569
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.