STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PATE2Prostate and testis expressed 2. (95 aa)    
Predicted Functional Partners:
ENSPCAP00000011039
annotation not available
  
  
 0.962
ENSPCAP00000007730
annotation not available
     
 0.911
LYPD6
LY6/PLAUR domain containing 6.
     
 0.910
CHRNA4
Cholinergic receptor nicotinic alpha 4 subunit.
     
 0.864
ENSPCAP00000000142
annotation not available
     
  0.863
CHRNA6
Cholinergic receptor nicotinic alpha 6 subunit.
     
  0.863
CHRNA10
Cholinergic receptor nicotinic alpha 10 subunit.
     
  0.863
CHRNA5
Cholinergic receptor nicotinic alpha 5 subunit.
     
  0.863
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
     
  0.863
ENSPCAP00000004377
annotation not available
     
  0.863
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.