STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR3WD repeat domain 3. (866 aa)    
Predicted Functional Partners:
TBL3
Transducin beta like 3.
   
 0.999
NAT10
N-acetyltransferase 10.
   
 0.999
ENSPCAP00000004442
annotation not available
   
 0.999
WDR46
WD repeat domain 46.
   
 0.999
UTP4
UTP4 small subunit processome component.
   
 0.999
UTP18
UTP18 small subunit processome component.
   
 0.999
NOC4L
Nucleolar complex associated 4 homolog.
   
 0.999
HEATR1
HEAT repeat containing 1.
   
 0.999
BMS1
BMS1 ribosome biogenesis factor.
   
 0.999
ENSPCAP00000013968
annotation not available
   
 0.999
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.