Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NCAPH2non-SMC condensin II complex subunit H2. (599 aa)    
Predicted Functional Partners:
NCAPG2
non-SMC condensin II complex subunit G2.
   
 0.999
NCAPD3
non-SMC condensin II complex subunit D3.
   
 0.999
SMC4
Structural maintenance of chromosomes 4.
   
 0.999
SMC2
Structural maintenance of chromosomes 2.
   
 0.998
NCAPD2
non-SMC condensin I complex subunit D2.
   
 0.981
NCAPG
non-SMC condensin I complex subunit G.
   
 0.974
ENSPCAP00000008776
annotation not available
   
 
 0.973
SMC3
Structural maintenance of chromosomes 3.
   
 0.815
SMC5
Structural maintenance of chromosomes 5.
   
 0.795
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
   0.789
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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