STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ERP27Endoplasmic reticulum protein 27. (258 aa)    
Predicted Functional Partners:
EEF1D
Eukaryotic translation elongation factor 1 delta.
    
 
 0.946
SUOX
Sulfite oxidase.
   
 0.895
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.886
CARS1
cysteinyl-tRNA synthetase 1.
  
   0.870
PDIA3
Protein disulfide isomerase family A member 3.
   
 0.861
ENSPCAP00000012460
annotation not available
    
 
 0.797
PDE6H
Phosphodiesterase 6H.
      
 0.774
VARS1
valyl-tRNA synthetase 1.
   
 
 0.767
ERP29
Endoplasmic reticulum protein 29.
   
 0.759
PDIA4
Protein disulfide isomerase family A member 4.
   
 0.756
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.