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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASC3CASC3 exon junction complex subunit. (702 aa)    
Predicted Functional Partners:
EIF4A3
Eukaryotic translation initiation factor 4A3.
    
 0.998
ENSPCAP00000001998
annotation not available
   
 0.992
ENSPCAP00000013369
annotation not available
   
 0.992
UPF1
UPF1 RNA helicase and ATPase.
    
 0.982
RANBP2
RAN binding protein 2.
    
  0.979
MAGOHB
Mago homolog B, exon junction complex subunit.
    
 0.973
MAGOH
Mago homolog, exon junction complex subunit.
    
 0.973
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
    
 0.957
UPF3A
UPF3A regulator of nonsense mediated mRNA decay.
    
 0.957
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
    
 0.927
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.