STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001279annotation not available (208 aa)    
Predicted Functional Partners:
B2M
Beta-2-microglobulin.
   
 0.739
RPA2
Replication protein A2.
   
 0.739
CD8A
CD8a molecule.
    
 0.717
TAPBP
TAP binding protein.
   
 0.706
CALR3
Calreticulin 3.
    
  0.600
CALR
Calreticulin.
    
  0.600
ENSPCAP00000015472
annotation not available
    
  0.579
ENSPCAP00000007783
annotation not available
   
  0.574
ENSPCAP00000004557
annotation not available
    
 0.561
ENSPCAP00000007885
annotation not available
    
 0.561
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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