STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD50Ankyrin repeat domain 50. (1419 aa)    
Predicted Functional Partners:
PPP6C
Protein phosphatase 6 catalytic subunit.
   
 0.850
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 0.724
PPP6R1
Protein phosphatase 6 regulatory subunit 1.
    
 0.724
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.724
VPS29
VPS29 retromer complex component.
   
 
 0.692
IFT81
Intraflagellar transport 81.
    
 0.691
SKP1
S-phase kinase associated protein 1.
    
 0.673
VPS35
VPS35 retromer complex component.
    
 
 0.668
MYO3B
Myosin IIIB.
    
 0.665
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.663
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.