STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001281annotation not available (700 aa)    
Predicted Functional Partners:
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.936
SYMPK
Symplekin.
    
 0.930
ENSPCAP00000007952
annotation not available
    
 0.930
CPSF2
Cleavage and polyadenylation specific factor 2.
    
 0.930
RBBP6
RB binding protein 6, ubiquitin ligase.
    
 0.926
ENSPCAP00000007547
annotation not available
    
 0.925
ENSPCAP00000006073
annotation not available
    
 0.922
WDR82
WD repeat domain 82.
    
 0.922
CSTF1
Cleavage stimulation factor subunit 1.
    
 0.912
NUDT21
Nudix hydrolase 21.
    
 0.907
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.