Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001281annotation not available (700 aa)    
Predicted Functional Partners:
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.983
CSTF2T
Cleavage stimulation factor subunit 2 tau variant.
    
 0.982
SYMPK
Symplekin.
    
 0.982
ENSPCAP00000007547
annotation not available
    
 0.982
ENSPCAP00000007952
annotation not available
    
 0.982
CPSF2
Cleavage and polyadenylation specific factor 2.
    
 0.982
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.982
NUDT21
Nudix hydrolase 21.
    
 0.981
CSTF1
Cleavage stimulation factor subunit 1.
   
 0.981
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
 0.979
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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