STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001287annotation not available (405 aa)    
Predicted Functional Partners:
ENSPCAP00000005109
annotation not available
   
 
 0.889
ENSPCAP00000002253
annotation not available
    
 
 0.887
NSUN4
NOP2/Sun RNA methyltransferase 4.
  
 
 0.887
ENSPCAP00000012446
annotation not available
  
 
 0.884
MRPL19
Mitochondrial ribosomal protein L19.
  
 
 0.864
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
  
 
 0.860
MRPL20
Mitochondrial ribosomal protein L20.
  
 
 0.854
ENSPCAP00000001997
annotation not available
  
 
 0.852
MRPL27
Mitochondrial ribosomal protein L27.
  
 
 0.850
MRPL58
Mitochondrial ribosomal protein L58.
  
 
 0.838
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.