Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NOL7Nucleolar protein 7. (258 aa)    
Predicted Functional Partners:
NOL11
Nucleolar protein 11.
    
 
 0.972
UTP4
UTP4 small subunit processome component.
    
 
 0.971
WDR43
WD repeat domain 43.
    
 
 0.961
UTP15
UTP15 small subunit processome component.
    
 
 0.959
WDR75
WD repeat domain 75.
    
   0.954
FCF1
FCF1 rRNA-processing protein.
   
 
 0.883
UTP3
UTP3 small subunit processome component.
   
 
 0.846
UTP20
UTP20 small subunit processome component.
    
 
 0.843
HEATR1
HEAT repeat containing 1.
    
 
 0.843
NOP58
NOP58 ribonucleoprotein.
   
 
 0.798
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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