WDR55 protein (Procavia capensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

WDR55

WD repeat domain 55. (379 aa)

Predicted Functional Partners:

WDR12

0.899

IK

0.776

ENSPCAP00000015177

0.753

TTC27

0.751

DDX18

0.700

WDR18

0.690

WDR74

0.689

KRR1

0.682

TRMT6

0.670

PES1

0.653

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX18	ENSPCAP00000015177	ENSPCAP00000009601	ENSPCAP00000015177	DEAD-box helicase 18.	annotation not available	0.997
DDX18	IK	ENSPCAP00000009601	ENSPCAP00000001203	DEAD-box helicase 18.	IK cytokine.	0.479
DDX18	KRR1	ENSPCAP00000009601	ENSPCAP00000009578	DEAD-box helicase 18.	KRR1 small subunit processome component homolog.	0.988
DDX18	PES1	ENSPCAP00000009601	ENSPCAP00000010800	DEAD-box helicase 18.	Pescadillo ribosomal biogenesis factor 1.	0.996
DDX18	TRMT6	ENSPCAP00000009601	ENSPCAP00000011271	DEAD-box helicase 18.	tRNA methyltransferase 6.	0.850
DDX18	TTC27	ENSPCAP00000009601	ENSPCAP00000014448	DEAD-box helicase 18.	Tetratricopeptide repeat domain 27.	0.451
DDX18	WDR12	ENSPCAP00000009601	ENSPCAP00000007463	DEAD-box helicase 18.	WD repeat domain 12.	0.997
DDX18	WDR18	ENSPCAP00000009601	ENSPCAP00000004737	DEAD-box helicase 18.	WD repeat domain 18.	0.880
DDX18	WDR55	ENSPCAP00000009601	ENSPCAP00000001307	DEAD-box helicase 18.	WD repeat domain 55.	0.700
DDX18	WDR74	ENSPCAP00000009601	ENSPCAP00000015654	DEAD-box helicase 18.	WD repeat domain 74.	0.992
ENSPCAP00000015177	DDX18	ENSPCAP00000015177	ENSPCAP00000009601	annotation not available	DEAD-box helicase 18.	0.997
ENSPCAP00000015177	KRR1	ENSPCAP00000015177	ENSPCAP00000009578	annotation not available	KRR1 small subunit processome component homolog.	0.977
ENSPCAP00000015177	PES1	ENSPCAP00000015177	ENSPCAP00000010800	annotation not available	Pescadillo ribosomal biogenesis factor 1.	0.994
ENSPCAP00000015177	TRMT6	ENSPCAP00000015177	ENSPCAP00000011271	annotation not available	tRNA methyltransferase 6.	0.682
ENSPCAP00000015177	WDR12	ENSPCAP00000015177	ENSPCAP00000007463	annotation not available	WD repeat domain 12.	0.995
ENSPCAP00000015177	WDR18	ENSPCAP00000015177	ENSPCAP00000004737	annotation not available	WD repeat domain 18.	0.958
ENSPCAP00000015177	WDR55	ENSPCAP00000015177	ENSPCAP00000001307	annotation not available	WD repeat domain 55.	0.753
ENSPCAP00000015177	WDR74	ENSPCAP00000015177	ENSPCAP00000015654	annotation not available	WD repeat domain 74.	0.986
IK	DDX18	ENSPCAP00000001203	ENSPCAP00000009601	IK cytokine.	DEAD-box helicase 18.	0.479
IK	WDR55	ENSPCAP00000001203	ENSPCAP00000001307	IK cytokine.	WD repeat domain 55.	0.776