STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCEA1Transcription elongation factor A1. (301 aa)    
Predicted Functional Partners:
GTF2F1
General transcription factor IIF subunit 1.
    
 0.996
GTF2E1
General transcription factor IIE subunit 1.
    
 0.994
GTF2B
General transcription factor IIB.
   
 0.993
SUPT6H
SPT6 homolog, histone chaperone and transcription elongation factor.
   
 0.991
POLR2I
RNA polymerase II subunit I.
   
 0.990
ENSPCAP00000006560
annotation not available
    
 0.988
POLR2E
RNA polymerase II subunit E.
   
 0.988
ENSPCAP00000010414
annotation not available
   
 0.987
POLR2K
RNA polymerase II subunit K.
  
 0.984
ENSPCAP00000003064
annotation not available
   
 0.983
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.