STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBR5Ubiquitin protein ligase E3 component n-recognin 5. (2794 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
   
  
0.986
UBC
Ubiquitin C.
    
 
 0.862
USP34
Ubiquitin specific peptidase 34.
   
  
 0.736
ENSPCAP00000008939
annotation not available
   
   0.711
ENSPCAP00000009329
annotation not available
   
   0.711
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
   
   0.711
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3.
   
   0.690
ARFGEF1
ADP ribosylation factor guanine nucleotide exchange factor 1.
   
    0.685
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
  
 0.682
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
    
   0.670
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.