Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SOX6SRY-box transcription factor 6. (826 aa)    
Predicted Functional Partners:
SOX5
SRY-box transcription factor 5.
   
 
 0.992
CTNNB1
Catenin beta 1.
   
 0.939
SOX13
SRY-box transcription factor 13.
    
 
 0.915
TRIP12
Thyroid hormone receptor interactor 12.
    
 
 0.798
JUP
Junction plakoglobin.
   
 0.784
BPTF
Bromodomain PHD finger transcription factor.
    
  0.715
FOXJ3
Forkhead box J3.
    
 
 0.660
DMRT1
Doublesex and mab-3 related transcription factor 1.
    
 
 0.628
COL2A1
Collagen type II alpha 1 chain.
    
 
 0.628
ENSPCAP00000011455
annotation not available
    
 
 0.617
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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