Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D22ATBC1 domain family member 22A. (518 aa)    
Predicted Functional Partners:
ACBD3
acyl-CoA binding domain containing 3.
    
 
 0.978
MICU1
Mitochondrial calcium uptake 1.
    
   0.850
MRPS5
Mitochondrial ribosomal protein S5.
   
   0.790
MRPS9
Mitochondrial ribosomal protein S9.
    
 
 0.780
RAB1A
RAB1A, member RAS oncogene family.
    
 
 0.772
RAB1B
RAB1B, member RAS oncogene family.
    
 
 0.772
ENSPCAP00000012226
annotation not available
    
   0.765
MRPS6
Mitochondrial ribosomal protein S6.
    
   0.763
DAP3
Death associated protein 3.
    
   0.763
RPS18
Ribosomal protein S18.
    
 
 0.745
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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