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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D22ATBC1 domain family member 22A. (518 aa)    
Predicted Functional Partners:
RAB1A
RAB1A, member RAS oncogene family.
    
 
 0.710
ACBD3
acyl-CoA binding domain containing 3.
    
 
 0.710
RAB1B
RAB1B, member RAS oncogene family.
    
 
 0.710
MRPS6
Mitochondrial ribosomal protein S6.
    
   0.689
MRPL21
Mitochondrial ribosomal protein L21.
    
 
 0.665
MRPS9
Mitochondrial ribosomal protein S9.
    
 
 0.665
MRPL41
Mitochondrial ribosomal protein L41.
   
   0.641
MRPS35
Mitochondrial ribosomal protein S35.
    
   0.636
MRPL20
Mitochondrial ribosomal protein L20.
    
   0.627
MRPL46
Mitochondrial ribosomal protein L46.
    
   0.627
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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