Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM245Transmembrane protein 245. (901 aa)    
Predicted Functional Partners:
USP34
Ubiquitin specific peptidase 34.
   
    0.702
MYOM3
Myomesin 3.
     
  0.692
SRA1
Steroid receptor RNA activator 1.
      
 0.686
GTF3C1
General transcription factor IIIC subunit 1.
      
 0.581
GABPB1
GA binding protein transcription factor subunit beta 1.
      
 0.564
ENSPCAP00000009069
annotation not available
     
  0.541
TINF2
TERF1 interacting nuclear factor 2.
     
  0.541
EIF2B1
Eukaryotic translation initiation factor 2B subunit alpha.
      
 0.502
KIAA1522
KIAA1522.
      
 0.499
ENSPCAP00000002503
annotation not available
    
   0.474
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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