STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL6A3Collagen type VI alpha 3 chain. (3125 aa)    
Predicted Functional Partners:
ENSPCAP00000006712
annotation not available
   
 0.998
ENSPCAP00000007645
annotation not available
   
 0.991
ENSPCAP00000013862
annotation not available
    
 0.901
COL6A6
Collagen type VI alpha 6 chain.
     
  0.895
ENSPCAP00000010063
annotation not available
     
 0.895
ITGA11
Integrin subunit alpha 11.
   
 0.888
ITGA2
Integrin subunit alpha 2.
    
 0.883
ITGA1
Integrin subunit alpha 1.
    
 0.881
ITGA10
Integrin subunit alpha 10.
    
 0.875
ENSPCAP00000005989
annotation not available
    
 0.874
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.