STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL6A3Collagen type VI alpha 3 chain. (3125 aa)    
Predicted Functional Partners:
CD44
CD44 molecule (Indian blood group).
    
 0.890
ENSPCAP00000007645
annotation not available
   
0.883
ENSPCAP00000006712
annotation not available
   
0.862
COL1A2
Collagen type I alpha 2 chain.
   
 
0.831
ENSPCAP00000013862
annotation not available
    
 0.790
ENSPCAP00000014868
annotation not available
    
 0.766
ITGB1
Integrin subunit beta 1.
    
 0.753
ITGA5
Integrin subunit alpha 5.
    
 0.751
ENSPCAP00000005989
annotation not available
    
 0.745
ITGB6
Integrin subunit beta 6.
    
 0.743
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.