STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCL1RNA terminal phosphate cyclase like 1. (370 aa)    
Predicted Functional Partners:
BMS1
BMS1 ribosome biogenesis factor.
   
 0.999
WDR43
WD repeat domain 43.
   
 0.998
BYSL
Bystin like.
   
 
 0.997
ENSPCAP00000004442
annotation not available
   
 
 0.997
UTP4
UTP4 small subunit processome component.
   
 0.997
UTP18
UTP18 small subunit processome component.
   
 0.997
HEATR1
HEAT repeat containing 1.
   
 0.997
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 
 0.996
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
 
 0.996
WDR75
WD repeat domain 75.
   
 0.995
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.