STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDLRLow density lipoprotein receptor. (858 aa)    
Predicted Functional Partners:
LDLRAP1
Low density lipoprotein receptor adaptor protein 1.
    
 0.988
PCSK9
Proprotein convertase subtilisin/kexin type 9.
    
 0.966
MYLIP
Myosin regulatory light chain interacting protein.
    
 0.964
DAB2
DAB adaptor protein 2.
    
 0.930
RELN
Reelin.
    
 0.916
DAB1
DAB adaptor protein 1.
    
 0.895
APOB
Apolipoprotein B.
    
 0.851
DKK1
Dickkopf WNT signaling pathway inhibitor 1.
    
 0.805
ENSPCAP00000011183
annotation not available
    
 0.789
AGRN
Agrin.
    
 0.764
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.