STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB6EF-hand calcium binding domain 6. (1489 aa)    
Predicted Functional Partners:
DNAI1
Dynein axonemal intermediate chain 1.
   
 0.836
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.826
MYO3A
Myosin IIIA.
   
 0.802
MYO3B
Myosin IIIB.
   
 0.802
EFCAB1
EF-hand calcium binding domain 1.
   
 0.795
CCDC65
Coiled-coil domain containing 65.
   
   0.785
ENSPCAP00000007583
annotation not available
   
  0.779
ENSPCAP00000007853
annotation not available
   
  0.779
ENSPCAP00000007734
annotation not available
   
 
 0.771
ENSPCAP00000007308
annotation not available
    
 
 0.770
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.