ENSPCAP00000001374 protein (Procavia capensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

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Coexpression

Experiments

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[Homology]

Score

ENSPCAP00000001374

annotation not available (294 aa)

Predicted Functional Partners:

ENSPCAP00000009880

0.988

ENSPCAP00000005990

0.905

CASP3

0.895

CASP7

0.876

XKR9

0.867

XKR7

0.865

XKR6

0.851

PLSCR3

0.769

NPTN

0.751

ENSPCAP00000013852

0.692

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CASP3	CASP7	ENSPCAP00000002308	ENSPCAP00000002983	Caspase 3.	Caspase 7.	0.930
CASP3	ENSPCAP00000001374	ENSPCAP00000002308	ENSPCAP00000001374	Caspase 3.	annotation not available	0.895
CASP3	ENSPCAP00000005990	ENSPCAP00000002308	ENSPCAP00000005990	Caspase 3.	annotation not available	0.881
CASP3	XKR6	ENSPCAP00000002308	ENSPCAP00000012697	Caspase 3.	XK related 6.	0.881
CASP3	XKR7	ENSPCAP00000002308	ENSPCAP00000011848	Caspase 3.	XK related 7.	0.881
CASP3	XKR9	ENSPCAP00000002308	ENSPCAP00000016098	Caspase 3.	XK related 9.	0.879
CASP7	CASP3	ENSPCAP00000002983	ENSPCAP00000002308	Caspase 7.	Caspase 3.	0.930
CASP7	ENSPCAP00000001374	ENSPCAP00000002983	ENSPCAP00000001374	Caspase 7.	annotation not available	0.876
CASP7	ENSPCAP00000005990	ENSPCAP00000002983	ENSPCAP00000005990	Caspase 7.	annotation not available	0.711
CASP7	XKR6	ENSPCAP00000002983	ENSPCAP00000012697	Caspase 7.	XK related 6.	0.711
CASP7	XKR7	ENSPCAP00000002983	ENSPCAP00000011848	Caspase 7.	XK related 7.	0.711
CASP7	XKR9	ENSPCAP00000002983	ENSPCAP00000016098	Caspase 7.	XK related 9.	0.880
ENSPCAP00000001374	CASP3	ENSPCAP00000001374	ENSPCAP00000002308	annotation not available	Caspase 3.	0.895
ENSPCAP00000001374	CASP7	ENSPCAP00000001374	ENSPCAP00000002983	annotation not available	Caspase 7.	0.876
ENSPCAP00000001374	ENSPCAP00000005990	ENSPCAP00000001374	ENSPCAP00000005990	annotation not available	annotation not available	0.905
ENSPCAP00000001374	ENSPCAP00000009880	ENSPCAP00000001374	ENSPCAP00000009880	annotation not available	annotation not available	0.988
ENSPCAP00000001374	ENSPCAP00000013852	ENSPCAP00000001374	ENSPCAP00000013852	annotation not available	annotation not available	0.692
ENSPCAP00000001374	NPTN	ENSPCAP00000001374	ENSPCAP00000001762	annotation not available	Neuroplastin.	0.751
ENSPCAP00000001374	PLSCR3	ENSPCAP00000001374	ENSPCAP00000006165	annotation not available	Phospholipid scramblase 3.	0.769
ENSPCAP00000001374	XKR6	ENSPCAP00000001374	ENSPCAP00000012697	annotation not available	XK related 6.	0.851