Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001390annotation not available (257 aa)    
Predicted Functional Partners:
TRIM7
Tripartite motif containing 7.
    
 
 0.703
TBC1D21
TBC1 domain family member 21.
   
  
 0.633
ARMC1
Armadillo repeat containing 1.
      
 0.605
FCSK
Fucose kinase.
      
 0.582
AKAP1
A-kinase anchoring protein 1.
      
 0.563
VDAC3
Voltage dependent anion channel 3.
      
 0.562
COG4
Component of oligomeric golgi complex 4.
      
 0.551
CIB3
Calcium and integrin binding family member 3.
    
 
 0.542
ENSPCAP00000012147
annotation not available
      
 0.528
ENSPCAP00000013367
annotation not available
      
 0.528
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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